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LOC101928421 uncharacterized LOC101928421 [ Homo sapiens (human) ]

Gene ID: 101928421, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101928421
Gene description
uncharacterized LOC101928421
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101928421 in Genome Data Viewer
Location:
7p14.2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (35593993..35631625, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (35734907..35772584, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs2286 Neighboring gene uncharacterized LOC105375230 Neighboring gene VISTA enhancer hs461 Neighboring gene VISTA enhancer hs472 Neighboring gene VISTA enhancer hs463 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18095 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:35614811-35615311 Neighboring gene uncharacterized LOC124901614 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:35641191-35641691 Neighboring gene HERPUD family member 2 Neighboring gene MPRA-validated peak6479 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:35733884-35734771 Neighboring gene HERPUD2 antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    35593993..35631625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007060285.1 RNA Sequence

  2. XR_007060284.1 RNA Sequence

  3. XR_001745169.3 RNA Sequence

  4. XR_927172.4 RNA Sequence

  5. XR_242157.5 RNA Sequence

  6. XR_001745168.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    35734907..35772584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078405.1 RNA Sequence

  2. XR_007078402.1 RNA Sequence

  3. XR_007078404.1 RNA Sequence

  4. XR_007078401.1 RNA Sequence

  5. XR_007078403.1 RNA Sequence

  6. XR_007078406.1 RNA Sequence

  7. XR_007078400.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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