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LOC101928462 uncharacterized LOC101928462 [ Homo sapiens (human) ]

Gene ID: 101928462, updated on 17-Sep-2024

Summary

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Gene symbol
LOC101928462
Gene description
uncharacterized LOC101928462
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in thyroid (RPKM 1.4), brain (RPKM 0.3) and 13 other tissues See more
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Genomic context

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See LOC101928462 in Genome Data Viewer
Location:
14q31.1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (81014066..81170406, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (75226273..75386660, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene thyroid stimulating hormone receptor Neighboring gene GPRASP3 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5983 Neighboring gene ribosomal protein L17 pseudogene 3 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:81507651-81507772 Neighboring gene NMNAT1 pseudogene 1 Neighboring gene uncharacterized LOC105370594 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8823 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8824 Neighboring gene general transcription factor IIA subunit 1 Neighboring gene GTF2A1 intron CAGE-defined high expression enhancer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5984 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5985 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5986 Neighboring gene small nucleolar RNA, H/ACA box 79 Neighboring gene GTF2A1 antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    81014066..81170406 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001751022.2 RNA Sequence

  2. XR_007064290.1 RNA Sequence

  3. XR_001751018.3 RNA Sequence

  4. XR_007064288.1 RNA Sequence

  5. XR_007064287.1 RNA Sequence

  6. XR_007064286.1 RNA Sequence

  7. XR_007064289.1 RNA Sequence

  8. XR_007064291.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    75226273..75386660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007084973.1 RNA Sequence

  2. XR_007084976.1 RNA Sequence

  3. XR_007084977.1 RNA Sequence

  4. XR_007084975.1 RNA Sequence

  5. XR_007084972.1 RNA Sequence

  6. XR_007084971.1 RNA Sequence

  7. XR_007084970.1 RNA Sequence

  8. XR_007084974.1 RNA Sequence

  9. XR_007084978.1 RNA Sequence

Nucleotide Protein
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