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MIR325HG MIR325 host gene [ Homo sapiens (human) ]

Gene ID: 101928469, updated on 10-Oct-2023

Summary

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Official Symbol
MIR325HGprovided by HGNC
Official Full Name
MIR325 host geneprovided by HGNC
Primary source
HGNC:HGNC:50346
See related
Ensembl:ENSG00000280870 AllianceGenome:HGNC:50346
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MIR384HG
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
Xq13.3-q21.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (76657798..77014532, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (75091609..75448375, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (75878199..76234957, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex 13 pseudogene 1 Neighboring gene RNA, 5S ribosomal pseudogene 508 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:75945635-75946136 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:75946137-75946636 Neighboring gene microRNA 384 Neighboring gene microRNA 325 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:76266438-76266938 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:76266939-76267439 Neighboring gene uncharacterized LOC105373254 Neighboring gene RNA, 5S ribosomal pseudogene 509

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Other Names

  • MIR325 host gene (non-protein coding)

Clone Names

  • FLJ25017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110400.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AK057746, AK311342, DB170434

  2. NR_110401.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon but contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AK057746, AK311342, DA217157, DA389464

  3. NR_110402.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks an exon and contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AK057746, AK311342, DA286367
    Related
    ENST00000630388.2

  4. NR_110403.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks an exon and contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AK057746, AK311342, DA286367

  5. NR_110404.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) lacks an internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AK057746, AK311342, DA388267

  6. NR_110405.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) lacks two exons but contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AK057746, AK311342, DA300762

  7. NR_110406.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) lacks two exons but contains a different internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AK057746, AK311342, DA256943

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    76657798..77014532 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    75091609..75448375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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