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SIRPG-AS1 SIRPG antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101929010, updated on 10-Oct-2023

Summary

Official Symbol
SIRPG-AS1provided by HGNC
Official Full Name
SIRPG antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:51229
See related
Ensembl:ENSG00000237914 AllianceGenome:HGNC:51229
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
20p13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (1633508..1648473)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (1649642..1664607)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (1614154..1629119)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372499 Neighboring gene signal regulatory protein delta Neighboring gene uncharacterized LOC107985409 Neighboring gene signal regulatory protein beta 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:1615736-1616561 Neighboring gene signal regulatory protein gamma Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17458 Neighboring gene NANOG hESC enhancer GRCh37_chr20:1653981-1654482 Neighboring gene RNA, 7SL, cytoplasmic 561, pseudogene Neighboring gene signal regulatory protein beta 3, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr20:1702530-1703102

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110090.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK093519, AL138804, HY205132
    Related
    ENST00000456177.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    1633508..1648473
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    1649642..1664607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)