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LOC101929234 uncharacterized LOC101929234 [ Homo sapiens (human) ]

Gene ID: 101929234, updated on 10-Oct-2023

Summary

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Gene symbol
LOC101929234
Gene description
uncharacterized LOC101929234
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101929234 in Genome Data Viewer
Location:
10q22.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (75409157..75411324)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (76283207..76285374)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (77168915..77171082)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene zinc finger protein 503 Neighboring gene uncharacterized LOC124902461 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:77160524-77161024 Neighboring gene VISTA enhancer hs484 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:77165968-77166707 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:77166708-77167448 Neighboring gene uncharacterized LOC107984293 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:77191190-77191690 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:77191691-77192191 Neighboring gene ZNF503 antisense RNA 2 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:77210325-77211210 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:77234571-77235319 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:77235320-77236067 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:77297811-77298425 Neighboring gene leucine rich melanocyte differentiation associated Neighboring gene microRNA 606

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110304.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK307176

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    75409157..75411324
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    76283207..76285374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases