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LOC101929240 U5 small nuclear ribonucleoprotein 200 kDa helicase-like [ Homo sapiens (human) ]

Gene ID: 101929240, updated on 10-Oct-2023

Summary

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Gene symbol
LOC101929240
Gene description
U5 small nuclear ribonucleoprotein 200 kDa helicase-like
Gene type
pseudo
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC101929240 in Genome Data Viewer
Location:
17q24.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (64750402..64751600)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (65620155..65621261)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene SMAD specific E3 ubiquitin protein ligase 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8844 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8845 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8846 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:62658719-62659277 Neighboring gene ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr17:62702502-62703701 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12600 Neighboring gene MICOS10 pseudogene 2 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:62755217-62755429 Neighboring gene karyopherin subunit alpha 2 pseudogene 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:62773916-62774585 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:62774586-62775254 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8849 Neighboring gene bromodomain PHD finger transcription factor pseudogene 1 Neighboring gene Rho GTPase activating protein 27 pseudogene 1 Neighboring gene microRNA 6080

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    64750402..64751600
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_243770.4 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    65620155..65621261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087695.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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