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LOC101929373 uncharacterized LOC101929373 [ Homo sapiens (human) ]

Gene ID: 101929373, updated on 10-Oct-2023

Summary

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Gene symbol
LOC101929373
Gene description
uncharacterized LOC101929373
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC101929373 in Genome Data Viewer
Location:
10q11.21
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (42242512..42276842)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (43120041..43154366)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene formin-2-like Neighboring gene uncharacterized LOC105378267 Neighboring gene poly(A) binding protein cytoplasmic 1 pseudogene 8 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42794470-42795297 Neighboring gene NANOG hESC enhancer GRCh37_chr10:42796185-42796686 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42796729-42797555 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42798247-42798939 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:42816107-42816891 Neighboring gene zinc finger protein 91 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3276 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3277 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3278 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3279

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    42242512..42276842
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001747436.2 RNA Sequence

  2. XR_001747434.2 RNA Sequence

  3. XR_001747433.2 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187579.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    125069..159399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001756330.2 RNA Sequence

  2. XR_001756328.2 RNA Sequence

  3. XR_001756327.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    43120041..43154366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081403.1 RNA Sequence

  2. XR_007081402.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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