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LOC101929552 uncharacterized LOC101929552 [ Homo sapiens (human) ]

Gene ID: 101929552, updated on 10-Oct-2023

Summary

Gene symbol
LOC101929552
Gene description
uncharacterized LOC101929552
See related
Ensembl:ENSG00000263063
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.7), brain (RPKM 0.3) and 10 other tissues See more
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Genomic context

Location:
17q25.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (82713908..82716253, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (83588297..83590640, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (80671784..80674129, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene RAB40B, member RAS oncogene family Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13014 Neighboring gene microRNA 4525 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80637586-80638111 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80638112-80638636 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9223 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9224 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr17:80660456-80661655 Neighboring gene uncharacterized LOC124904093 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80661763-80662564 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80671133-80671632 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9225 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9226 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9227 Neighboring gene fructosamine 3 kinase related protein Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:80687657-80688157 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:80692522-80693234 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:80693947-80694659 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:80694660-80695371 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:80701509-80702145 Neighboring gene fructosamine 3 kinase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136400.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC024361
    Related
    ENST00000574471.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    82713908..82716253 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    83588297..83590640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)