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KIZ-AS1 KIZ antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101929591, updated on 10-Oct-2023

Summary

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Official Symbol
KIZ-AS1provided by HGNC
Official Full Name
KIZ antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:51231
See related
Ensembl:ENSG00000232712 AllianceGenome:HGNC:51231
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
20p11.23
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (21194404..21218289, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (21253746..21277627, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (21175044..21198927, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 477 Neighboring gene kizuna centrosomal protein Neighboring gene ribosomal protein S15a pseudogene 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:21161538-21162038 Neighboring gene hESC enhancers GRCh37_chr20:21170163-21171136 and GRCh37_chr20:21171137-21172110 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:21204767-21205280 Neighboring gene VISTA enhancer hs914 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17620 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12714 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17621 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17622 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17623 Neighboring gene zinc finger protein 877, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:21272495-21272995 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12715 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17624 Neighboring gene 5'-3' exoribonuclease 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_109956.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL110120, BC034426, KF511297
    Related
    ENST00000443753.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    21194404..21218289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    21253746..21277627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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