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GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 [ Chrysemys picta bellii (western painted turtle) ]

Gene ID: 101939117, updated on 10-Oct-2024

Summary

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Gene symbol
GALNT7
Gene description
polypeptide N-acetylgalactosaminyltransferase 7
See related
Ensembl:ENSCPBG00000002652
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta bellii (sub-species: bellii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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See GALNT7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 5 NC_088795.1 (73812317..73933877)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281377.1 (5282949..5410357)

Chromosome 5 - NC_088795.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene uncharacterized LOC135983680 Neighboring gene uncharacterized LOC122172351 Neighboring gene uncharacterized LOC101938927 Neighboring gene uncharacterized LOC135983682 Neighboring gene uncharacterized LOC101939836 Neighboring gene high mobility group box 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1138683v2

Genomic

  1. NC_088795.1 Reference ASM1138683v2

    Range
    73812317..73933877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042842095.2 → XP_042698029.1  N-acetylgalactosaminyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C3F4R4, A0AAJ7XYS0
    Conserved Domains (2) summary
    cd02510
    Location:210 → 579
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:596 → 712
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_005300047.5 → XP_005300104.1  N-acetylgalactosaminyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C3F4R4, A0A8C3FA40
    Related
    ENSCPBP00000003272.1
    Conserved Domains (4) summary
    cd02510
    Location:210 → 518
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG1215
    Location:210 → 438
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    cd00161
    Location:535 → 651
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:534 → 649
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_005300048.5 → XP_005300105.1  N-acetylgalactosaminyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C3F4R4, A0A8C3F5W2
    Related
    ENSCPBP00000003285.1
    Conserved Domains (4) summary
    cd02510
    Location:210 → 518
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG1215
    Location:210 → 438
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    cd00161
    Location:535 → 651
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:534 → 649
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_065596585.1 → XP_065452657.1  N-acetylgalactosaminyltransferase 7 isoform X4

Nucleotide Protein
Heading Accession and Version

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