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E230013L22Rik RIKEN cDNA E230013L22 gene [ Mus musculus (house mouse) ]

Gene ID: 102132, updated on 26-Oct-2024

Summary

Official Symbol
E230013L22Rikprovided by MGI
Official Full Name
RIKEN cDNA E230013L22 geneprovided by MGI
Primary source
MGI:MGI:2142601
See related
AllianceGenome:MGI:2142601
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in heart adult (RPKM 11.1), kidney adult (RPKM 7.2) and 18 other tissues See more
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Genomic context

See E230013L22Rik in Genome Data Viewer
Location:
8 A1.1; 8 5.73 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (11527929..11530241)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (11477929..11480241)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene collagen, type IV, alpha 2 Neighboring gene predicted gene, 46030 Neighboring gene STARR-seq mESC enhancer starr_20711 Neighboring gene predicted gene 15419 Neighboring gene STARR-positive B cell enhancer ABC_E8227 Neighboring gene RAB20, member RAS oncogene family Neighboring gene NAD(P)HX dehydratase Neighboring gene cysteinyl-tRNA synthetase 2, mitochondrial Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:11550723-11550832

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126558.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124475, AK054035

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    11527929..11530241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)