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LOC102449564 protein Wnt-11b-2 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102449564, updated on 9-Nov-2023

Summary

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Gene symbol
LOC102449564
Gene description
protein Wnt-11b-2
See related
Ensembl:ENSPSIG00000011911
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Also known as
Wnt11b; PsWnt11b
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Genomic context

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See LOC102449564 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005852494.1 (1265664..1286195, complement)

NW_005852494.1Genomic Context describing neighboring genes Neighboring gene diacylglycerol O-acyltransferase 2-like Neighboring gene immunoglobulin binding protein 1 Neighboring gene ectodysplasin A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005852494 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan. Wang Z, et al. Nat Genet, 2013 Jun. PMID 23624526, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Wnt-11b-2
Names
wingless-type MMTV integration site family member 11b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005852494.1 Reference PelSin_1.0 Primary Assembly

    Range
    1265664..1286195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025180029.1 → XP_025035814.1  protein Wnt-11b-2 isoform X1

    Conserved Domains (1) summary
    pfam00110
    Location:87 → 393
    wnt; wnt family

  2. XM_006113681.3 → XP_006113743.1  protein Wnt-11b-2 isoform X2

    UniProtKB/TrEMBL
    K7FYY0
    Related
    ENSPSIP00000013240.1, ENSPSIT00000013303.1
    Conserved Domains (1) summary
    pfam00110
    Location:85 → 388
    wnt; wnt family

RNA

  1. XR_003087557.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases