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POMC proopiomelanocortin [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102461051, updated on 10-Mar-2024

Summary

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Gene symbol
POMC
Gene description
proopiomelanocortin
See related
Ensembl:ENSPSIG00000011544
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853411.1 (1735282..1746811, complement)

NW_005853411.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C27 Neighboring gene EFR3 homolog B Neighboring gene angiopoietin-related protein 7-like Neighboring gene leucine-rich repeat extensin-like protein 5 Neighboring gene stathmin 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853411 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning of proopiomelanocortin (POMC) cDNA from mud turtle, Pelodiscus sinensis. Shen ST, et al. Gen Comp Endocrinol, 2003 Apr. PMID 12679096

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pro-opiomelanocortin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001286918.1 → NP_001273847.1  pro-opiomelanocortin precursor

    See identical proteins and their annotated locations for NP_001273847.1

    Status: PROVISIONAL

    Source sequence(s)
    AY099290
    UniProtKB/TrEMBL
    Q7ZTV4
    Related
    ENSPSIP00000012850.1, ENSPSIT00000012911.1
    Conserved Domains (3) summary
    pfam00976
    Location:214 → 230
    ACTH_domain; Corticotropin ACTH domain
    pfam08035
    Location:231 → 258
    Op_neuropeptide; Opioids neuropeptide
    pfam08384
    Location:28 → 70
    NPP; Pro-opiomelanocortin, N-terminal region

RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853411.1 Reference PelSin_1.0 Primary Assembly

    Range
    1735282..1746811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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