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MIR6780B microRNA 6780b [ Homo sapiens (human) ]

Gene ID: 102466746, updated on 10-Oct-2023

Summary

Official Symbol
MIR6780Bprovided by HGNC
Official Full Name
microRNA 6780bprovided by HGNC
Primary source
HGNC:HGNC:50237
See related
Ensembl:ENSG00000276770 miRBase:MI0022681; AllianceGenome:HGNC:50237
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
hsa-mir-6780b
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR6780B in Genome Data Viewer
Location:
6p21.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (43434542..43434620)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (43263323..43263401)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (43402280..43402358)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene zinc finger protein 318 Neighboring gene atherin-like Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17227 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17228 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24598 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24599 Neighboring gene uncharacterized LOC105375065 Neighboring gene Sharpr-MPRA regulatory region 12040 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:43380603-43381102 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:43393233-43393754 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24600 Neighboring gene ATP binding cassette subfamily C member 10 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24601 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17229 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17230 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17231 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:43423943-43424784 Neighboring gene MPRA-validated peak5814 silencer Neighboring gene delta like non-canonical Notch ligand 2 Neighboring gene RNA, U6 small nuclear 1113, pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_106894.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL359813
    Related
    ENST00000610307.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    43434542..43434620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    43263323..43263401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)