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Mir6980 microRNA 6980 [ Mus musculus (house mouse) ]

Gene ID: 102466913, updated on 17-Aug-2024

Summary

Official Symbol
Mir6980provided by MGI
Official Full Name
microRNA 6980provided by MGI
Primary source
MGI:MGI:5531351
See related
Ensembl:ENSMUSG00000098297 miRBase:MI0022828; AllianceGenome:MGI:5531351
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm27969; mmu-mir-6980
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See Mir6980 in Genome Data Viewer
Location:
18; 18 B3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (38123940..38123998, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (37990887..37990945, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene FCH and double SH3 domains 1 Neighboring gene RELT-like 2 Neighboring gene microRNA 6981 Neighboring gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 Neighboring gene predicted gene, 30093 Neighboring gene predicted gene, 41701 Neighboring gene STARR-seq mESC enhancer starr_44342 Neighboring gene predicted gene, 30188 Neighboring gene STARR-seq mESC enhancer starr_44344 Neighboring gene predicted gene, 30142

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_105946.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC121886
    Related
    ENSMUST00000185063.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    38123940..38123998 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)