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LOC102547113 uncharacterized LOC102547113 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102547113, updated on 29-Feb-2024

Summary

Symbol
LOC102547113provided by RGD
Full Name
uncharacterized LOC102547113provided by RGD
Primary source
RGD:7658407
See related
AllianceGenome:RGD:7658407
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Brain (RPKM 20.4), Adrenal (RPKM 4.6) and 2 other tissues See more
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Genomic context

See LOC102547113 in Genome Data Viewer
Location:
2q34
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (175955432..175962904)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (173658487..173665069)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (187564786..187570731)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108350055 Neighboring gene myocyte enhancer factor 2D Neighboring gene uncharacterized LOC100911992 Neighboring gene microRNA 3597-1 Neighboring gene microRNA 9-1 Neighboring gene Rh family B glycoprotein

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    175955432..175962904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_591195.4 RNA Sequence