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LOC102549347 uncharacterized LOC102549347 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102549347, updated on 17-Aug-2024

Summary

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Symbol
LOC102549347provided by RGD
Full Name
uncharacterized LOC102549347provided by RGD
Primary source
RGD:7567902
See related
AllianceGenome:RGD:7567902
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Thymus (RPKM 19.4), Kidney (RPKM 15.9) and 9 other tissues See more
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Genomic context

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See LOC102549347 in Genome Data Viewer
Location:
2q14
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (41227416..41261624, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (39500063..39528170, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (39281933..39314656, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120100700 Neighboring gene uncharacterized LOC120100701 Neighboring gene uncharacterized LOC120100702 Neighboring gene small integral membrane protein 15 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 2 Neighboring gene uncharacterized LOC134485832

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    41227416..41261624 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005500632.2 RNA Sequence

  2. XR_005500625.2 RNA Sequence

  3. XR_005500626.2 RNA Sequence

  4. XR_010064070.1 RNA Sequence

  5. XR_005500630.2 RNA Sequence

  6. XR_005500624.2 RNA Sequence

  7. XR_005500622.2 RNA Sequence

  8. XR_010064072.1 RNA Sequence

  9. XR_010064071.1 RNA Sequence

  10. XR_010064069.1 RNA Sequence

  11. XR_010064073.1 RNA Sequence

  12. XR_005500628.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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