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LOC102549716 high mobility group protein B1-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 102549716, updated on 10-Oct-2024

Summary

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Symbol
LOC102549716provided by RGD
Full Name
high mobility group protein B1-likeprovided by RGD
Primary source
RGD:7733938
See related
AllianceGenome:RGD:7733938
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

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See LOC102549716 in Genome Data Viewer
Location:
17p14
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (15045186..15131044, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (14845351..14924605, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (15298894..15339696, complement)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene igE-binding protein-like Neighboring gene hypothetical protein LOC689526 Neighboring gene uncharacterized LOC120097917 Neighboring gene SPATA31 subfamily E, member 1 like 2 Neighboring gene uncharacterized LOC134482685 Neighboring gene small nucleolar RNA SNORA24 Neighboring gene isoleucyl-tRNA synthetase 1 Neighboring gene small nucleolar RNA SNORA84

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine/threonine-protein kinase MARK2-like; sperm motility kinase X-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    15045186..15131044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063276887.1 → XP_063132957.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  2. XM_063276886.1 → XP_063132956.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  3. XM_063276889.1 → XP_063132959.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  4. XM_063276888.1 → XP_063132958.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  5. XM_063276893.1 → XP_063132963.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  6. XM_063276885.1 → XP_063132955.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  7. XM_063276881.1 → XP_063132951.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  8. XM_063276880.1 → XP_063132950.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  9. XM_063276892.1 → XP_063132962.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  10. XM_063276891.1 → XP_063132961.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  11. XM_063276890.1 → XP_063132960.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  12. XM_063276882.1 → XP_063132952.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  13. XM_063276879.1 → XP_063132949.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  14. XM_063276884.1 → XP_063132954.1  serine/threonine-protein kinase MARK2-like isoform X1

    UniProtKB/TrEMBL
    A0A8I6GK16

  15. XM_063276895.1 → XP_063132965.1  sperm motility kinase X-like isoform X2

  16. XM_063276896.1 → XP_063132966.1  sperm motility kinase X-like isoform X2

  17. XM_063276899.1 → XP_063132969.1  sperm motility kinase X-like isoform X2

  18. XM_063276898.1 → XP_063132968.1  sperm motility kinase X-like isoform X2

  19. XM_063276897.1 → XP_063132967.1  sperm motility kinase X-like isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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