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Nat8f4 N-acetyltransferase 8 (GCN5-related) family member 4 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102549803, updated on 2-Nov-2024

Summary

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Symbol
Nat8f4provided by RGD
Full Name
N-acetyltransferase 8 (GCN5-related) family member 4provided by RGD
Primary source
RGD:7636572
See related
EnsemblRapid:ENSRNOG00000070875 AllianceGenome:RGD:7636572
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1563507
Summary
Predicted to enable N-acetyltransferase activity. Predicted to be involved in gastrulation. Predicted to be located in membrane. Orthologous to human NAT8 (N-acetyltransferase 8 (putative)) and NAT8B (N-acetyltransferase 8B (putative, gene/pseudogene)). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Liver (RPKM 132.8), Kidney (RPKM 72.5) and 8 other tissues See more
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Genomic context

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See Nat8f4 in Genome Data Viewer
Location:
4q34
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (119883557..119890066, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (118326092..118332591, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (117755646..117760096, complement)

Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene N-acetyltransferase 8, pseudogene 1 Neighboring gene N-acetyltransferase 8 (GCN5-related) family member 2 Neighboring gene N-acetyltransferase 8 (GCN5-related) family member 1 Neighboring gene Tp53rk binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables N-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in gastrulation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-acetyltransferase 8 (GCN5-related) family member 4; N-acetyltransferase family 8 member 2-like
Names
probable N-acetyltransferase CML2
probable N-acetyltransferase CML2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086022.1 Reference GRCr8

    Range
    119883557..119890066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006236818.4 → XP_006236880.1  N-acetyltransferase family 8 member 2-like

    See identical proteins and their annotated locations for XP_006236880.1

    UniProtKB/Swiss-Prot
    P85118
    UniProtKB/TrEMBL
    M0RDW3
    Related
    ENSRNOP00000107371.1, ENSRNOT00000127478.1
    Conserved Domains (2) summary
    cd04301
    Location:108 → 174
    NAT_SF; N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate
    COG0456
    Location:101 → 200
    RimI; Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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