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LOC102552398 uncharacterized LOC102552398 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102552398, updated on 17-Aug-2024

Summary

Symbol
LOC102552398provided by RGD
Full Name
uncharacterized LOC102552398provided by RGD
Primary source
RGD:7661862
See related
EnsemblRapid:ENSRNOG00000087193 AllianceGenome:RGD:7661862
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Testes (RPKM 11.0), Heart (RPKM 3.9) and 1 other tissue See more
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Genomic context

See LOC102552398 in Genome Data Viewer
Location:
8q24
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (71166692..71175956, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (62271150..62281677, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (66730387..66739980, complement)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480065 Neighboring gene uncharacterized LOC102551666 Neighboring gene TLE family member 3, transcriptional corepressor Neighboring gene ribosomal protein lateral stalk subunit P1 Neighboring gene kinesin family member 23

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    71166692..71175956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005488247.2 RNA Sequence

    Related
    ENSRNOT00000122718.1
  2. XR_356370.4 RNA Sequence

    Related
    ENSRNOT00000167066.1