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LOC102552830 uncharacterized LOC102552830 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102552830, discontinued on 6-Mar-2021

Summary

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Symbol
LOC102552830provided by RGD
Full Name
uncharacterized LOC102552830provided by RGD
Primary source
RGD:7578832
Gene type
ncRNA
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Kidney (RPKM 9.8), Liver (RPKM 6.5) and 2 other tissues See more
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Genomic context

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See LOC102552830 in Genome Data Viewer
Location:
1q41
Exon count:
2
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (205636629..205650361)
106 latest, but not current Rn_Celera (GCF_000002265.2) 1 AC_000069.1 (186150774..186164504)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005100.4 Reference Rnor_6.0 Primary Assembly

    Range
    205636629..205650361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_350787.3 RNA Sequence

Alternate Rn_Celera

Genomic

  1. AC_000069.1 Alternate Rn_Celera

    Range
    186150774..186164504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001845158.1 RNA Sequence

Gene LinkOut

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