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LOC102553981 uncharacterized LOC102553981 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102553981, discontinued on 26-Mar-2024
  • This record was withdrawn by the Rat Genome Database (RGD).

Summary

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Symbol
LOC102553981provided by RGD
Full Name
uncharacterized LOC102553981provided by RGD
Primary source
RGD:7566034
Gene type
ncRNA
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record was withdrawn by the Rat Genome Database (RGD).
Expression
Biased expression in Thymus (RPKM 28.9), Kidney (RPKM 26.4) and 9 other tissues See more
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Genomic context

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See LOC102553981 in Genome Data Viewer
Location:
4q42
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_06 latest, but not current mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (157727912..157734774)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (157436647..157447681)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227675.2-RS_2023_06 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051339.1 Reference mRatBN7.2 Primary Assembly

    Range
    157727912..157734774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005503867.1 RNA Sequence

Gene LinkOut

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