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LOC102554082 uncharacterized LOC102554082 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102554082, updated on 17-Aug-2024

Summary

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Symbol
LOC102554082provided by RGD
Full Name
uncharacterized LOC102554082provided by RGD
Primary source
RGD:7651247
See related
EnsemblRapid:ENSRNOG00000074559 AllianceGenome:RGD:7651247
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Brain (RPKM 10.9), Kidney (RPKM 1.4) and 6 other tissues See more
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Genomic context

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See LOC102554082 in Genome Data Viewer
Location:
7q34
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (118577898..118591735)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (116698159..116711879)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (126484978..126489953)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA48 Neighboring gene ataxin 10 Neighboring gene Wnt family member 7B Neighboring gene uncharacterized LOC120093705 Neighboring gene uncharacterized LOC134479761 Neighboring gene microRNA let7c-2 Neighboring gene microRNA let-7b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    118577898..118591735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010053457.1 RNA Sequence

    Related
    ENSRNOT00000141138.1

  2. XR_005487288.2 RNA Sequence

    Related
    ENSRNOT00000173793.1

  3. XR_001838991.3 RNA Sequence

  4. XR_010053458.1 RNA Sequence

  5. XR_005487290.2 RNA Sequence

  6. XR_001838990.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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