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LOC102554727 uncharacterized LOC102554727 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102554727, discontinued on 23-Mar-2021
  • This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.

Summary

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Symbol
LOC102554727provided by RGD
Full Name
uncharacterized LOC102554727provided by RGD
Primary source
RGD:7667336
Gene type
ncRNA
RefSeq status
WITHDRAWN
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
DISCONTINUED: This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.
Expression
Biased expression in Testes (RPKM 75.3), Kidney (RPKM 39.0) and 9 other tissues See more
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Genomic context

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See LOC102554727 in Genome Data Viewer
Location:
3q41
Exon count:
2
Annotation release Status Assembly Chr Location
106 latest, but not current Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (148827055..148827653, complement)
106 latest, but not current Rn_Celera (GCF_000002265.2) 3 AC_000071.1 (140558006..140558604, complement)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005102.4 Reference Rnor_6.0 Primary Assembly

    Range
    148827055..148827653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001837327.1 RNA Sequence

Alternate Rn_Celera

Genomic

  1. AC_000071.1 Alternate Rn_Celera

    Range
    140558006..140558604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001843117.1 RNA Sequence

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.