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LOC102555354 uncharacterized LOC102555354 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102555354, updated on 17-Aug-2024

Summary

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Symbol
LOC102555354provided by RGD
Full Name
uncharacterized LOC102555354provided by RGD
Primary source
RGD:7658496
See related
AllianceGenome:RGD:7658496
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Testes (RPKM 23.3), Brain (RPKM 7.1) and 9 other tissues See more
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Genomic context

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See LOC102555354 in Genome Data Viewer
Location:
1q43
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (211831691..211847620)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (202402316..202418240)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (220478568..220493510)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 151A Neighboring gene Yip1 interacting factor homolog A, membrane trafficking protein Neighboring gene cornichon family AMPA receptor auxiliary protein 2 Neighboring gene RAB1B, member RAS oncogene family Neighboring gene uncharacterized LOC120099979 Neighboring gene kinesin light chain 2 Neighboring gene uncharacterized LOC120099980 Neighboring gene phosphofurin acidic cluster sorting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    211831691..211847620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010061176.1 RNA Sequence

  2. XR_005499561.2 RNA Sequence

  3. XR_010061175.1 RNA Sequence

  4. XR_005499560.2 RNA Sequence

  5. XR_005499563.2 RNA Sequence

  6. XR_005499562.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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