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LOC102555909 uncharacterized LOC102555909 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102555909, updated on 17-Aug-2024

Summary

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Symbol
LOC102555909provided by RGD
Full Name
uncharacterized LOC102555909provided by RGD
Primary source
RGD:7591929
See related
AllianceGenome:RGD:7591929
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Liver (RPKM 774.7), Lung (RPKM 263.2) and 5 other tissues See more
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Genomic context

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See LOC102555909 in Genome Data Viewer
Location:
2q34
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (170540089..170650744)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (168241980..168296943)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (181874329..181900539)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene pancreatic progenitor cell differentiation and proliferation factor, pseudogene 1 Neighboring gene transcription factor BTF3 homolog 4-like Neighboring gene RNA binding motif protein 46 Neighboring gene lecithin retinol acyltransferase Neighboring gene fibrinogen gamma chain Neighboring gene fibrinogen alpha chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    170540089..170650744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010064330.1 RNA Sequence

  2. XR_010064335.1 RNA Sequence

  3. XR_010064336.1 RNA Sequence

  4. XR_010064338.1 RNA Sequence

  5. XR_010064337.1 RNA Sequence

  6. XR_591157.4 RNA Sequence

  7. XR_005501028.2 RNA Sequence

  8. XR_010064334.1 RNA Sequence

  9. XR_010064329.1 RNA Sequence

  10. XR_010064328.1 RNA Sequence

  11. XR_010064332.1 RNA Sequence

  12. XR_010064333.1 RNA Sequence

  13. XR_010064331.1 RNA Sequence

  14. XR_010064327.1 RNA Sequence

  15. XR_010064339.1 RNA Sequence

  16. XR_010064326.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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