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LOC102607782 guanosine deaminase [ Citrus sinensis (sweet orange) ]

Gene ID: 102607782, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102607782
Gene description
guanosine deaminase
Locus tag
KPL70_002219
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102607782 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 1 NC_068556.1 (24794689..24797517, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 9 NC_023054.1 (51653..54539)

Chromosome 1 - NC_068556.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102609144 Neighboring gene aspartic proteinase-like Neighboring gene hypothetical protein Neighboring gene 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in purine nucleoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanosine deaminase
Names
CMP/dCMP-type deaminase domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068556.1 Reference DVS_A1.0 Primary Assembly

    Range
    24794689..24797517 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006488648.4 → XP_006488711.1  guanosine deaminase isoform X2

    See identical proteins and their annotated locations for XP_006488711.1

    UniProtKB/TrEMBL
    A0A067EQT7
    Conserved Domains (1) summary
    cd01285
    Location:28 → 135
    nucleoside_deaminase; Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a ...

  2. XM_006488647.4 → XP_006488710.1  guanosine deaminase isoform X1

    See identical proteins and their annotated locations for XP_006488710.1

    Conserved Domains (1) summary
    cd01285
    Location:35 → 142
    nucleoside_deaminase; Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a ...
Nucleotide Protein
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