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LOC102630997 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [ Citrus sinensis (sweet orange) ]

Gene ID: 102630997, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102630997
Gene description
1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1
Locus tag
KPL70_002221
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Also known as
DHNAT1
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Genomic context

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See LOC102630997 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 1 NC_068556.1 (24802262..24803328, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 9 NC_023054.1 (45807..46942)

Chromosome 1 - NC_068556.1Genomic Context describing neighboring genes Neighboring gene guanosine deaminase Neighboring gene hypothetical protein Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phylloquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068556.1 Reference DVS_A1.0 Primary Assembly

    Range
    24802262..24803328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006488640.4 → XP_006488703.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

    Conserved Domains (1) summary
    cl00509
    Location:20 → 181
    hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
Nucleotide Protein
Heading Accession and Version

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