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Gm30003 predicted gene, 30003 [ Mus musculus (house mouse) ]

Gene ID: 102631739, updated on 17-Aug-2024

Summary

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Official Symbol
Gm30003provided by MGI
Official Full Name
predicted gene, 30003provided by MGI
Primary source
MGI:MGI:5589162
See related
AllianceGenome:MGI:5589162
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm43278
Expression
Broad expression in lung adult (RPKM 5.2), subcutaneous fat pad adult (RPKM 2.0) and 17 other tissues See more
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Genomic context

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See Gm30003 in Genome Data Viewer
Location:
5 G2; 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (134774304..134851822)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (134745712..134822968)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4H Neighboring gene LIM domain kinase 1 Neighboring gene STARR-positive B cell enhancer ABC_E1309 Neighboring gene predicted gene 10369 Neighboring gene STARR-positive B cell enhancer mm9_chr5:135180028-135180329 Neighboring gene elastin Neighboring gene STARR-seq mESC enhancer starr_14552 Neighboring gene transmembrane protein 270 Neighboring gene claudin 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    134774304..134851822
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_868585.4 RNA Sequence

  2. XR_868587.4 RNA Sequence

  3. XR_003955804.2 RNA Sequence

  4. XR_868583.4 RNA Sequence

  5. XR_003955805.2 RNA Sequence

  6. XR_868582.4 RNA Sequence

  7. XR_868586.4 RNA Sequence

  8. XR_377128.3 RNA Sequence

Nucleotide Protein Strain
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