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Tuba5-ps tubulin alpha 5, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 102634941, updated on 17-Aug-2024

Summary

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Official Symbol
Tuba5-psprovided by MGI
Official Full Name
tubulin alpha 5, pseudogeneprovided by MGI
Primary source
MGI:MGI:5580082
See related
AllianceGenome:MGI:5580082
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm29376
Expression
Ubiquitous expression in large intestine adult (RPKM 11.2), colon adult (RPKM 7.9) and 28 other tissues See more
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Genomic context

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See Tuba5-ps in Genome Data Viewer
Location:
1 E4; 1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (134441166..134455309)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (134518781..134527562)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene kelch-like 12 Neighboring gene STARR-positive B cell enhancer ABC_E3304 Neighboring gene RAB interacting factor Neighboring gene predicted gene, 25612 Neighboring gene predicted gene 15454 Neighboring gene STARR-seq mESC enhancer starr_02337 Neighboring gene predicted gene, 46159 Neighboring gene STARR-seq mESC enhancer starr_02338 Neighboring gene MGAT4 family, member E Neighboring gene predicted gene, 46160

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_148746.1 

    Range
    101..14244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    134441166..134455309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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