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Gm13348 predicted gene 13348 [ Mus musculus (house mouse) ]

Gene ID: 102637193, updated on 22-Oct-2024

Summary

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Official Symbol
Gm13348provided by MGI
Official Full Name
predicted gene 13348provided by MGI
Primary source
MGI:MGI:3649255
See related
Ensembl:ENSMUSG00000086621 AllianceGenome:MGI:3649255
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 2.5) See more
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Genomic context

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See Gm13348 in Genome Data Viewer
Location:
2 A3; 2 13.73 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (19638844..19641840, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (19634033..19637029, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4921504E06 gene Neighboring gene STARR-seq mESC enhancer starr_03826 Neighboring gene STARR-positive B cell enhancer mm9_chr2:19427465-19427766 Neighboring gene STARR-positive B cell enhancer mm9_chr2:19450447-19450747 Neighboring gene STARR-seq mESC enhancer starr_03827 Neighboring gene predicted gene, 39764 Neighboring gene STARR-seq mESC enhancer starr_03829 Neighboring gene STARR-seq mESC enhancer starr_03830 Neighboring gene STARR-positive B cell enhancer ABC_E5895 Neighboring gene STARR-positive B cell enhancer ABC_E5896 Neighboring gene STARR-positive B cell enhancer ABC_E4416 Neighboring gene STARR-positive B cell enhancer ABC_E7795 Neighboring gene predicted gene 3230 Neighboring gene OTU domain containing 1 Neighboring gene GTPase activating protein (SH3 domain) binding protein 2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_166087.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL928877
    Related
    ENSMUST00000352969.1

  2. NR_166088.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL928877
    Related
    ENSMUST00000352967.1

  3. NR_166089.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL928877
    Related
    ENSMUST00000352961.1

  4. NR_166090.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL928877
    Related
    ENSMUST00000352968.1

  5. NR_166091.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL928877
    Related
    ENSMUST00000352958.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    19638844..19641840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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