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Gm12843 predicted gene 12843 [ Mus musculus (house mouse) ]

Gene ID: 102637763, updated on 17-Aug-2024

Summary

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Official Symbol
Gm12843provided by MGI
Official Full Name
predicted gene 12843provided by MGI
Primary source
MGI:MGI:3651051
See related
AllianceGenome:MGI:3651051
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm12843 in Genome Data Viewer
Location:
4 53.44 cM; 4 D1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (117146405..117162586)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (117289360..117305389)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23287 Neighboring gene armadillo-like helical domain containing 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:116923419-116923602 Neighboring gene STARR-positive B cell enhancer ABC_E7982 Neighboring gene transmembrane protein 53 Neighboring gene STARR-seq mESC enhancer starr_11163 Neighboring gene ring finger protein 220 Neighboring gene predicted gene, 40231 Neighboring gene STARR-seq mESC enhancer starr_11170 Neighboring gene STARR-seq mESC enhancer starr_11172 Neighboring gene STARR-seq mESC enhancer starr_11174 Neighboring gene STARR-seq mESC enhancer starr_11177 Neighboring gene STARR-seq mESC enhancer starr_11178 Neighboring gene STARR-seq mESC enhancer starr_11179 Neighboring gene STARR-seq mESC enhancer starr_11180 Neighboring gene predicted gene 12828

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    117146405..117162586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942165.1 RNA Sequence

  2. XR_004942169.1 RNA Sequence

  3. XR_004942166.1 RNA Sequence

  4. XR_004942172.1 RNA Sequence

  5. XR_004942168.1 RNA Sequence

  6. XR_004942167.1 RNA Sequence

  7. XR_003955258.2 RNA Sequence

  8. XR_003955264.2 RNA Sequence

  9. XR_004942170.1 RNA Sequence

  10. XR_004942171.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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