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Gm35216 predicted gene, 35216 [ Mus musculus (house mouse) ]

Gene ID: 102638722, updated on 8-Feb-2024

Summary

Official Symbol
Gm35216provided by MGI
Official Full Name
predicted gene, 35216provided by MGI
Primary source
MGI:MGI:5594375
See related
Ensembl:ENSMUSG00000107598 AllianceGenome:MGI:5594375
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 14.9) See more
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Genomic context

See Gm35216 in Genome Data Viewer
Location:
6 B2.1; 6
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (44057422..44060289, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (44080488..44083355, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_15742 Neighboring gene STARR-seq mESC enhancer starr_15743 Neighboring gene STARR-seq mESC enhancer starr_15744 Neighboring gene STARR-seq mESC enhancer starr_15745 Neighboring gene predicted gene, 22939 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-seq mESC enhancer starr_15746 Neighboring gene STARR-seq mESC enhancer starr_15749 Neighboring gene STARR-seq mESC enhancer starr_15750 Neighboring gene STARR-seq mESC enhancer starr_15751 Neighboring gene contactin associated protein-like 2 Neighboring gene STARR-seq mESC enhancer starr_15752 Neighboring gene STARR-seq mESC enhancer starr_15753 Neighboring gene STARR-seq mESC enhancer starr_15754 Neighboring gene STARR-seq mESC enhancer starr_15755 Neighboring gene STARR-seq mESC enhancer starr_15756 Neighboring gene crumbs homolog 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_15757 Neighboring gene STARR-seq mESC enhancer starr_15758 Neighboring gene STARR-seq mESC enhancer starr_15759 Neighboring gene STARR-seq mESC enhancer starr_15760 Neighboring gene predicted gene, 25161

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_167996.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC152958
  2. NR_167997.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC152958, BB610326
    Related
    ENSMUST00000203777.2
  3. NR_167998.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC152958
  4. NR_167999.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC152958
  5. NR_168000.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC152958

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    44057422..44060289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)