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LOC102724439 uncharacterized LOC102724439 [ Homo sapiens (human) ]

Gene ID: 102724439, updated on 22-Oct-2024

Summary

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Gene symbol
LOC102724439
Gene description
uncharacterized LOC102724439
See related
Ensembl:ENSG00000297231
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC102724439 in Genome Data Viewer
Location:
10q25.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (106285468..106310956)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (107172454..107197879)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378469 Neighboring gene long intergenic non-protein coding RNA 2624 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:108038893-108039076 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr10:108226813-108227338 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr10:108227339-108227864 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:108294965-108295705 Neighboring gene uncharacterized LOC105378472 Neighboring gene ribosomal protein L23a pseudogene 59

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    106285468..106310956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_946297.3 RNA Sequence

  2. XR_428810.4 RNA Sequence

    Related
    ENST00000746356.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    107172454..107197879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081462.1 RNA Sequence

  2. XR_007081463.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials