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LOC102724517 uncharacterized LOC102724517 [ Homo sapiens (human) ]

Gene ID: 102724517, updated on 17-Sep-2024

Summary

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Gene symbol
LOC102724517
Gene description
uncharacterized LOC102724517
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 4.1), adrenal (RPKM 1.6) and 18 other tissues See more
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Genomic context

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See LOC102724517 in Genome Data Viewer
Location:
17q11.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (28043338..28048926)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (28984741..28990329)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr17:26360641-26361840 Neighboring gene uncharacterized LOC105371709 Neighboring gene Sharpr-MPRA regulatory region 3957 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8332 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 8333 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11917 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11918 Neighboring gene nemo like kinase Neighboring gene NANOG hESC enhancer GRCh37_chr17:26440640-26441141 Neighboring gene ribosomal protein S29 pseudogene 22 Neighboring gene uncharacterized LOC105371711

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    28043338..28048926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001752820.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    28984741..28990329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087343.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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