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FAM245B family with sequence similarity 245 member B [ Homo sapiens (human) ]

Gene ID: 102724643, updated on 17-Sep-2024

Summary

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Official Symbol
FAM245Bprovided by HGNC
Official Full Name
family with sequence similarity 245 member Bprovided by HGNC
Primary source
HGNC:HGNC:54133
See related
Ensembl:ENSG00000285662 AllianceGenome:HGNC:54133
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in kidney (RPKM 1.8), liver (RPKM 1.1) and 1 other tissue See more
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Genomic context

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See FAM245B in Genome Data Viewer
Location:
10q11.22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (46740571..46751733)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (47628615..47639771)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (48987629..48998791, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene shieldin complex subunit 2 pseudogene 1 Neighboring gene RNA, 7SL, cytoplasmic 248, pseudogene Neighboring gene uncharacterized LOC101927584 Neighboring gene glutamate dehydrogenase 1 pseudogene 2 Neighboring gene cathepsin L pseudogene 3 Neighboring gene dual specificity phosphatase 8 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187477.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL731733
    Related
    ENST00000649270.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    46740571..46751733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    47628615..47639771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials