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LOC102877680 acid-sensing ion channel 2-like [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102877680, updated on 22-Oct-2023

Summary

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Gene symbol
LOC102877680
Gene description
acid-sensing ion channel 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
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Genomic context

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See LOC102877680 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399844.1 (2191532..2192737)

NW_006399844.1Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 11 Neighboring gene C-C motif chemokine ligand 2 Neighboring gene 60S ribosomal protein L32-like Neighboring gene acid-sensing (proton-gated) ion channel 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399844 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ligand-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acid-sensing ion channel 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399844.1 Reference EleEdw1.0

    Range
    2191532..2192737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006891061.1 → XP_006891123.1  acid-sensing ion channel 2-like

    Conserved Domains (1) summary
    cl02990
    Location:18 → 186
    ASC; Amiloride-sensitive sodium channel
Nucleotide Protein
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