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LOC102877684 RNA polymerase II-associated factor 1 homolog [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102877684, updated on 25-Jan-2024

Summary

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Gene symbol
LOC102877684
Gene description
RNA polymerase II-associated factor 1 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC102877684 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399854.1 (10133138..10134391)

NW_006399854.1Genomic Context describing neighboring genes Neighboring gene probable protein BRICK1-like Neighboring gene nucleophosmin/nucleoplasmin 3 pseudogene Neighboring gene nipsnap homolog 1 (C. elegans) pseudogene Neighboring gene fucosyltransferase 8 (alpha (1,6) fucosyltransferase) Neighboring gene E3 ubiquitin-protein ligase MARCH8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399854 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase II-associated factor 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399854.1 Reference EleEdw1.0

    Range
    10133138..10134391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006891833.1 → XP_006891895.1  RNA polymerase II-associated factor 1 homolog

    Conserved Domains (1) summary
    pfam03985
    Location:30 → 378
    Paf1; Paf1
Nucleotide Protein
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