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APOOL apolipoprotein O like [ Panthera tigris (tiger) ]

Gene ID: 102972977, updated on 10-Mar-2024

Summary

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Gene symbol
APOOL
Gene description
apolipoprotein O like
See related
Ensembl:ENSPTIG00000008881
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See APOOL in Genome Data Viewer
Location:
chromosome: X
Exon count:
10
Annotation release Status Assembly Chr Location
102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) X NC_056677.1 (70951362..71045965, complement)

Chromosome X - NC_056677.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122235479 Neighboring gene zinc finger protein 711 Neighboring gene U6 spliceosomal RNA Neighboring gene vacuolar protein sorting-associated protein 72 homolog Neighboring gene CHM Rab escort protein Neighboring gene U6 spliceosomal RNA Neighboring gene dachshund family transcription factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056677.1 Chromosome X Reference P.tigris_Pti1_mat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cristae formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MICOS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MICOS complex subunit MIC27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.tigris_Pti1_mat1.1 Primary Assembly

Genomic

  1. NC_056677.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Range
    70951362..71045965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042973722.1 → XP_042829656.1  MICOS complex subunit MIC27 isoform X3

    UniProtKB/TrEMBL
    A0A8C9JFY2

  2. XM_007093298.3 → XP_007093360.2  MICOS complex subunit MIC27 isoform X1

    UniProtKB/TrEMBL
    A0A8C9JFY2

  3. XM_042973721.1 → XP_042829655.1  MICOS complex subunit MIC27 isoform X2

    UniProtKB/TrEMBL
    A0A8C9JFY2
Nucleotide Protein
Heading Accession and Version

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