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HS2ST1 heparan sulfate 2-O-sulfotransferase 1 [ Eptesicus fuscus (big brown bat) ]

Gene ID: 103300866, updated on 30-Mar-2024

Summary

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Gene symbol
HS2ST1
Gene description
heparan sulfate 2-O-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Orthologs
human mouse all
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Genomic context

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See HS2ST1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 9 NC_072481.1 (64346362..64531626)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370827.1 (168361..356119)

Chromosome 9 - NC_072481.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA33 Neighboring gene selenoprotein F Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene fatty acid-binding protein, heart-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate 2-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072481.1 Reference DD_ASM_mEF_20220401

    Range
    64346362..64531626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028134326.2 → XP_027990127.1  heparan sulfate 2-O-sulfotransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:71 → 327
    Sulfotransfer_2; Sulfotransferase family

  2. XM_008157783.3 → XP_008156005.1  heparan sulfate 2-O-sulfotransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_008156005.1

    Conserved Domains (1) summary
    pfam03567
    Location:71 → 326
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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