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ALOX5AP arachidonate 5-lipoxygenase activating protein [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103529483, updated on 3-Aug-2024

Summary

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Gene symbol
ALOX5AP
Gene description
arachidonate 5-lipoxygenase activating protein
Locus tag
N300_09466
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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See ALOX5AP in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 1 NC_044244.1 (176522498..176542944, complement)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007620101.1 (2472258..2485105)

Chromosome 1 - NC_044244.1Genomic Context describing neighboring genes Neighboring gene beta 3-glucosyltransferase Neighboring gene heat shock protein family H (Hsp110) member 1 Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene transfer RNA valine (anticodon AAC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutathione peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables leukotriene-C4 synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in leukotriene biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arachidonate 5-lipoxygenase-activating protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044244.1 Reference bCalAnn1_v1.p

    Range
    176522498..176542944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008494928.2 → XP_008493150.1  arachidonate 5-lipoxygenase-activating protein

    UniProtKB/TrEMBL
    A0A091I2R8
    Conserved Domains (1) summary
    pfam01124
    Location:50 → 128
    MAPEG; MAPEG family
Nucleotide Protein
Heading Accession and Version

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