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PTGFR prostaglandin F receptor [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103759553, updated on 3-Aug-2024

Summary

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Gene symbol
PTGFR
Gene description
prostaglandin F receptor
Locus tag
N305_08765
See related
Ensembl:ENSMVIG00005020007
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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See PTGFR in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021940737.1 (2165822..2184602, complement)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017220225.1 (2285931..2305035, complement)

NW_021940737.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor L4 Neighboring gene vitellogenin-1-like Neighboring gene GIPC PDZ domain containing family member 2 Neighboring gene DnaJ heat shock protein family (Hsp40) member B4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prostaglandin F receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin F2-alpha receptor
Names
Prostaglandin F2-alpha receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021940737.1 Reference ASM171598v3

    Range
    2165822..2184602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018083791.1 → XP_017939280.1  prostaglandin F2-alpha receptor isoform X2

    Conserved Domains (1) summary
    pfam00001
    Location:42 → 150
    7tm_1; 7 transmembrane receptor (rhodopsin family)

  2. XM_018083788.1 → XP_017939277.1  prostaglandin F2-alpha receptor isoform X1

    UniProtKB/TrEMBL
    A0A093QF07
    Conserved Domains (1) summary
    pfam00001
    Location:42 → 301
    7tm_1; 7 transmembrane receptor (rhodopsin family)

  3. XM_008925956.2 → XP_008924204.1  prostaglandin F2-alpha receptor isoform X2

    Conserved Domains (1) summary
    pfam00001
    Location:42 → 150
    7tm_1; 7 transmembrane receptor (rhodopsin family)

  4. XM_018083789.1 → XP_017939278.1  prostaglandin F2-alpha receptor isoform X1

    UniProtKB/TrEMBL
    A0A093QF07
    Related
    ENSMVIP00005028760.1, ENSMVIT00005032312.1
    Conserved Domains (1) summary
    pfam00001
    Location:42 → 301
    7tm_1; 7 transmembrane receptor (rhodopsin family)
Nucleotide Protein
Heading Accession and Version

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