U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PIRT phosphoinositide interacting regulator of transient receptor potential channels [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104308616, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
PIRT
Gene description
phosphoinositide interacting regulator of transient receptor potential channels
Locus tag
N307_15218
See related
EnsemblRapid:ENSPPUG00010016339
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PIRT in Genome Data Viewer
Location:
chromosome: 20
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 20 NC_071631.1 (20700123..20700539, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009661805.1 (12457..12855)

Chromosome 20 - NC_071631.1Genomic Context describing neighboring genes Neighboring gene nudE neurodevelopment protein 1 like 1 Neighboring gene ring finger protein 222 Neighboring gene dehydrogenase/reductase 7C Neighboring gene GSG1 like 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phosphoinositide-interacting protein
Names
Phosphoinositide-interacting protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071631.1 Reference bDryPub1.pri

    Range
    20700123..20700539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009909821.2 → XP_009908123.1  phosphoinositide-interacting protein

    See identical proteins and their annotated locations for XP_009908123.1

    UniProtKB/TrEMBL
    A0A093I6P9
    Related
    ENSPPUP00010015333.1, ENSPPUT00010025453.1
    Conserved Domains (1) summary
    pfam15099
    Location:5 → 132
    PIRT; Phosphoinositide-interacting protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.