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PRR5L proline rich 5 like [ Tyto alba (common barn owl) ]

Gene ID: 104357430, updated on 3-Aug-2024

Summary

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Gene symbol
PRR5L
Gene description
proline rich 5 like
Locus tag
N341_04968
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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See PRR5L in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881280.1 (1153982..1198154)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009984942.1 (4082..16331, complement)

NW_024881280.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 9 Neighboring gene uncharacterized LOC116965815 Neighboring gene uncharacterized LOC116965816 Neighboring gene TNF receptor associated factor 6 Neighboring gene recombination activating 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in TORC2 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TORC2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline-rich protein 5-like
Names
Proline-rich protein 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881280.1 Reference T.alba_DEE_v4.0

    Range
    1153982..1198154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042791239.1 → XP_042647173.1  proline-rich protein 5-like isoform X1

    Conserved Domains (1) summary
    pfam08539
    Location:51 → 170
    HbrB; HbrB-like

  2. XM_042791241.1 → XP_042647175.1  proline-rich protein 5-like isoform X3

    Conserved Domains (1) summary
    pfam08539
    Location:51 → 151
    HbrB; HbrB-like

  3. XM_042791240.1 → XP_042647174.1  proline-rich protein 5-like isoform X2

  4. XM_042791242.1 → XP_042647176.1  proline-rich protein 5-like isoform X4

  5. XM_033011274.2 → XP_032867165.1  proline-rich protein 5-like isoform X1

    Conserved Domains (1) summary
    pfam08539
    Location:51 → 170
    HbrB; HbrB-like
Nucleotide Protein
Heading Accession and Version

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