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IFTAP intraflagellar transport associated protein [ Tyto alba (common barn owl) ]

Gene ID: 104365495, updated on 3-Aug-2024

Summary

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Gene symbol
IFTAP
Gene description
intraflagellar transport associated protein
Locus tag
N341_03151
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Also known as
CUNH11orf74
Orthologs
human mouse all
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Genomic context

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See IFTAP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881280.1 (1255098..1335514)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_010016159.1 (12338..41180)

NW_024881280.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122153311 Neighboring gene recombination activating 1 Neighboring gene recombination activating 2 Neighboring gene uncharacterized LOC122153289 Neighboring gene leucine rich repeat containing 4C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables intraciliary transport particle A binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acrosome reaction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in 9+0 non-motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport-associated protein
Names
chromosome unknown C11orf74 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881280.1 Reference T.alba_DEE_v4.0

    Range
    1255098..1335514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042790865.1 → XP_042646799.1  intraflagellar transport-associated protein

    UniProtKB/TrEMBL
    A0A093FJS5
    Conserved Domains (1) summary
    pfam17722
    Location:1 → 217
    DUF5567; Family of unknown function (DUF5567)

  2. XM_042790864.1 → XP_042646798.1  intraflagellar transport-associated protein

    UniProtKB/TrEMBL
    A0A093FJS5
    Conserved Domains (1) summary
    pfam17722
    Location:1 → 217
    DUF5567; Family of unknown function (DUF5567)

  3. XM_042790861.1 → XP_042646795.1  intraflagellar transport-associated protein

    UniProtKB/TrEMBL
    A0A093FJS5
    Conserved Domains (1) summary
    pfam17722
    Location:1 → 217
    DUF5567; Family of unknown function (DUF5567)

  4. XM_042790863.1 → XP_042646797.1  intraflagellar transport-associated protein

    UniProtKB/TrEMBL
    A0A093FJS5
    Conserved Domains (1) summary
    pfam17722
    Location:1 → 217
    DUF5567; Family of unknown function (DUF5567)
Nucleotide Protein
Heading Accession and Version

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