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IFNB1 interferon beta 1 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105095933, updated on 19-Apr-2024

Summary

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Gene symbol
IFNB1
Gene description
interferon beta 1
Locus tag
Cadr_000015578
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See IFNB1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 10 NC_087445.1 (18998289..18999127)
101 previous assembly CamDro3 (GCF_000803125.2) 4 NC_044514.1 (6710021..6710581)

Chromosome 10 - NC_087445.1Genomic Context describing neighboring genes Neighboring gene interferon omega-1 Neighboring gene interferon alpha-14 Neighboring gene tubulin alpha-1C chain-like Neighboring gene 3-hydroxyacyl-CoA dehydratase 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Beta interferons from the extant camelids: Unique among eutherian mammals. Premraj A, et al. Dev Comp Immunol, 2022 Aug. PMID 35568245, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon beta
Names
Interferon beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087445.1 Reference mCamDro1.pat

    Range
    18998289..18999127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010988144.2 → XP_010986446.1  interferon beta

    See identical proteins and their annotated locations for XP_010986446.1

    UniProtKB/TrEMBL
    A0A5N4E9B0
    Conserved Domains (1) summary
    pfam00143
    Location:27 → 182
    Interferon; Interferon alpha/beta domain
Nucleotide Protein
Heading Accession and Version

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