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Gm40582 predicted gene, 40582 [ Mus musculus (house mouse) ]

Gene ID: 105245082, updated on 17-Aug-2024

Summary

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Official Symbol
Gm40582provided by MGI
Official Full Name
predicted gene, 40582provided by MGI
Primary source
MGI:MGI:5623467
See related
AllianceGenome:MGI:5623467
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm40582 in Genome Data Viewer
Location:
9 F3; 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (116000136..116007675)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (116175644..116178607)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E10588 Neighboring gene vaccinia related kinase 1 pseudogene Neighboring gene transforming growth factor, beta receptor II Neighboring gene STARR-seq mESC enhancer starr_25413 Neighboring gene STARR-seq mESC enhancer starr_25414 Neighboring gene predicted gene, 31292 Neighboring gene STARR-positive B cell enhancer ABC_E2919 Neighboring gene predicted gene 4668 Neighboring gene STARR-seq mESC enhancer starr_25415 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:116123514-116123697 Neighboring gene STARR-positive B cell enhancer mm9_chr9:116125815-116126116 Neighboring gene STARR-positive B cell enhancer ABC_E10589 Neighboring gene STARR-positive B cell enhancer ABC_E6810 Neighboring gene STARR-positive B cell enhancer ABC_E1396 Neighboring gene STARR-seq mESC enhancer starr_25416 Neighboring gene predicted gene, 31410 Neighboring gene STARR-seq mESC enhancer starr_25417 Neighboring gene Tgfbr2 Hedgehog-responsive enhancer

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    116000136..116007675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004935694.1 RNA Sequence

  2. XR_871321.2 RNA Sequence

  3. XR_871320.3 RNA Sequence

  4. XR_871319.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials