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Gm40667 predicted gene, 40667 [ Mus musculus (house mouse) ]

Gene ID: 105245177, updated on 17-Aug-2024

Summary

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Official Symbol
Gm40667provided by MGI
Official Full Name
predicted gene, 40667provided by MGI
Primary source
MGI:MGI:5623552
See related
AllianceGenome:MGI:5623552
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in heart adult (RPKM 3.7), bladder adult (RPKM 0.8) and 1 other tissue See more
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Genomic context

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See Gm40667 in Genome Data Viewer
Location:
13 A1; 13
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (12324591..12338374)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (12309705..12323488)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein S7 pseudogene Neighboring gene predicted gene 10336 Neighboring gene STARR-positive B cell enhancer mm9_chr13:12302569-12302869 Neighboring gene 5-methyltetrahydrofolate-homocysteine methyltransferase Neighboring gene STARR-positive B cell enhancer ABC_E7201 Neighboring gene STARR-seq mESC enhancer starr_33665 Neighboring gene STARR-seq mESC enhancer starr_33666 Neighboring gene actinin alpha 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:12487435-12487618 Neighboring gene predicted gene 5445 Neighboring gene HEAT repeat containing 1 Neighboring gene predicted gene 5928

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    12324591..12338374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_873138.3 RNA Sequence

  2. XR_004938180.1 RNA Sequence

  3. XR_003950500.1 RNA Sequence

  4. XR_003950501.1 RNA Sequence

  5. XR_382081.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials