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LOC105369574 uncharacterized LOC105369574 [ Homo sapiens (human) ]

Gene ID: 105369574, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105369574
Gene description
uncharacterized LOC105369574
See related
Ensembl:ENSG00000301321
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105369574 in Genome Data Viewer
Location:
11q24.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (130522467..130533952)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (130558183..130594262)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:130289647-130290148 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8 Neighboring gene NANOG hESC enhancer GRCh37_chr11:130321509-130322010 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 15 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:130347582-130348781 Neighboring gene NANOG hESC enhancer GRCh37_chr11:130378843-130379344 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:130381109-130382308 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr11:130386937-130387456 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:130389783-130390284 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:130392807-130393434 Neighboring gene MPRA-validated peak1516 silencer Neighboring gene 11q24.3 proximal HERV-mediated recombination region Neighboring gene BCL2 antagonist/killer 1 pseudogene 2 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:130470970-130471655 Neighboring gene microRNA 8052

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    130522467..130533952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007062953.1 RNA Sequence

    Related
    ENST00000777978.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    130558183..130594262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081851.1 RNA Sequence

  2. XR_007081850.1 RNA Sequence

  3. XR_007081848.1 RNA Sequence

  4. XR_007081849.1 RNA Sequence

  5. XR_007081847.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials