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LOC105370021 uncharacterized LOC105370021 [ Homo sapiens (human) ]

Gene ID: 105370021, updated on 10-Dec-2024

Summary

Gene symbol
LOC105370021
Gene description
uncharacterized LOC105370021
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC105370021 in Genome Data Viewer
Location:
12q24.23
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (119110877..119124970, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (119098321..119112422, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix 4 Neighboring gene RNA, 7SL, cytoplasmic 508, pseudogene Neighboring gene uncharacterized LOC105370022 Neighboring gene NANOG hESC enhancer GRCh37_chr12:119493434-119493935 Neighboring gene MPRA-validated peak1997 silencer Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:119526455-119527045 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:119527046-119527635 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:119527912-119528566 Neighboring gene uncharacterized LOC112268101 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:119591444-119591976 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:119591977-119592507 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:119604289-119604789 Neighboring gene uncharacterized LOC105370024 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:119613960-119615159

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    119110877..119124970 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_945429.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    119098321..119112422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083135.1 RNA Sequence

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